STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN77918.1Competence protein ec. (739 aa)    
Predicted Functional Partners:
KRN77919.1
Hypothetical protein.
 
  
 0.897
KRN77917.1
DNA polymerase III subunit delta.
 
   
 0.725
KRN77170.1
DNA protecting protein DprA.
 
  
 0.670
KRN76490.1
Hypothetical protein.
 
  
 0.646
KRN77920.1
Hypothetical protein; Belongs to the UPF0473 family.
       0.569
KRN76280.1
ComG operon protein 1.
 
  
 0.530
KRN76281.1
Hypothetical protein.
   
  
 0.498
KRN77922.1
Crossover junction endodeoxyribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.489
KRN76704.1
Competence damage-inducible protein A; Belongs to the CinA family.
     
 0.471
cinA
CinA-like protein; Belongs to the CinA family.
     
 0.471
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.