STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN75918.1Abc superfamily atp binding cassette transporter, atpase. (227 aa)    
Predicted Functional Partners:
KRN75919.1
Transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.999
KRN75920.1
Hypothetical protein.
 
 0.994
KRN76042.1
Hypothetical protein.
  
 0.951
KRN75921.1
Cell surface protein.
 
    0.786
KRN76003.1
Cation abc superfamily atp binding cassette transporter, membrane protein.
    
 0.544
KRN78114.1
Abc-transporter plng (bacteriocin abc transporter).
  
     0.542
KRN75922.1
Hypothetical protein.
       0.539
KRN76154.1
Manganese ABC transporter, membrane-spanning subunit.
    
 0.535
KRN76155.1
ABC-type metal ion transport system, periplasmic component surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.528
KRN76001.1
Abc superfamily atp binding cassette transporter, binding protein.
  
 
 0.505
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.