Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
KRN75982.1Histidine kinase. (415 aa)    
Predicted Functional Partners:
KRN75981.1
Two-component response regulator.
 0.999
KRN75989.1
Two-component response regulator.
 0.968
KRN77073.1
Response regulator.
 0.966
KRN77348.1
Response regulator.
 0.960
KRN77121.1
Response regulator.
 0.956
KRN76958.1
34-dihydroxy-2-butanone 4-phosphate synthase gtp cyclohydrolase ii; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
 0.808
KRN76866.1
Abc superfamily atp binding cassette transporter, abc membrane protein.
  
 0.800
KRN76933.1
Pyruvate dehydrogenase (acetyl-transferring).
    
 0.700
menE
Acyl-coa synthetase (amp-forming) amp-acid ligase ii; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
   
 0.651
KRN77305.1
Hypothetical protein.
  
 0.636
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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