Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN75989.1Two-component response regulator. (229 aa)    
Predicted Functional Partners:
KRN75990.1
Signal transduction histidine kinase.
 0.989
KRN75982.1
Histidine kinase.
 0.968
KRN77072.1
Histidine kinase.
 0.963
KRN77120.1
Histidine protein kinase.
 0.960
KRN77349.1
Histidine protein kinase.
 0.952
KRN76958.1
34-dihydroxy-2-butanone 4-phosphate synthase gtp cyclohydrolase ii; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
     
 0.728
KRN75988.1
Hypothetical protein.
       0.709
sigA
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.684
ychF
GTP-binding translation factor YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.682
rpoA
DNA-directed RNA polymerase, alpha subunit 40 kD subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.678
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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