STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN77631.1Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (358 aa)    
Predicted Functional Partners:
KRN77629.1
Glycerol-3-phosphate ABC transporter permease.
 0.999
KRN77630.1
Glycerol-3-phosphate ABC transporter permease.
 
 0.999
KRN77628.1
Glycerol-3-phosphate ABC transporter substrate-binding protein.
 0.998
KRN76360.1
ABC transporter ATP binding protein.
    
0.905
KRN77046.1
ABC superfamily ATP binding cassette transporter, ATPase.
 
  
 
0.903
KRN76175.1
Sucrose PTS, EIIBCA.
   
 
 0.799
KRN77106.1
ATP-binding protein.
 
     
0.780
KRN77712.1
Spermidine putrescine ABC transporter permease protein.
  
 0.730
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
   0.709
KRN77442.1
PTS system beta-glucoside-specific transporter subunit IIA.
   
 
 0.706
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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