STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN77313.1Polysaccharide biosynthesis protein. (823 aa)    
Predicted Functional Partners:
KRN76640.1
UDP-galactopyranose mutase.
  
  
 0.890
KRN77923.1
Hypothetical protein; Belongs to the UPF0297 family.
  
     0.669
KRN76717.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.651
mrnC
Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.618
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.617
KRN76793.1
S-adenosyl-L-methionine-dependent methyltransferase.
  
     0.579
KRN77323.1
Atp-dependent helicase deoxyribonuclease subunit b; ATP-dependent DNA helicase.
  
     0.577
KRN77703.1
Hypothetical protein.
    
 0.573
KRN77773.1
Rhodanese family protein.
  
     0.550
rpoE
DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.549
Your Current Organism:
Weissella minor
NCBI taxonomy Id: 1620
Other names: ATCC 35412, BCRC 14049, CCRC 14049, CCRC:14049, CCUG 30668, CECT 572, CIP 102978, DSM 20014, LMG 9847, LMG:9847, Lactobacillus minor, Lactobacillus viridescens subsp. minor, NCIMB 701973, W. minor, strain 3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.