Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKM84617.1 | nfo | VE98_C0001G0160 | VE98_C0001G0250 | Superoxide dismutase. | Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.507 |
| AKM84617.1 | recA | VE98_C0001G0160 | VE98_C0001G0516 | Superoxide dismutase. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.530 |
| AKM84706.1 | AKM84708.1 | VE98_C0001G0249 | VE98_C0001G0251 | Bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase. | ATP dependent DNA ligase, DNA ligase (ATP). | 0.529 |
| AKM84706.1 | nfo | VE98_C0001G0249 | VE98_C0001G0250 | Bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase. | Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.636 |
| AKM84708.1 | AKM84706.1 | VE98_C0001G0251 | VE98_C0001G0249 | ATP dependent DNA ligase, DNA ligase (ATP). | Bifunctional phosphoglucose/phosphomannose isomerase, glucose/mannose-6-phosphate isomerase. | 0.529 |
| AKM84708.1 | AKM84739.1 | VE98_C0001G0251 | VE98_C0001G0282 | ATP dependent DNA ligase, DNA ligase (ATP). | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | 0.728 |
| AKM84708.1 | AKM85002.1 | VE98_C0001G0251 | VE98_C0001G0548 | ATP dependent DNA ligase, DNA ligase (ATP). | Polymerase I protein. | 0.987 |
| AKM84708.1 | nfo | VE98_C0001G0251 | VE98_C0001G0250 | ATP dependent DNA ligase, DNA ligase (ATP). | Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.746 |
| AKM84708.1 | recA | VE98_C0001G0251 | VE98_C0001G0516 | ATP dependent DNA ligase, DNA ligase (ATP). | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.481 |
| AKM84708.1 | topA | VE98_C0001G0251 | VE98_C0001G0214 | ATP dependent DNA ligase, DNA ligase (ATP). | Topoisomerase I, DNA topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken stran [...] | 0.494 |
| AKM84739.1 | AKM84708.1 | VE98_C0001G0282 | VE98_C0001G0251 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | ATP dependent DNA ligase, DNA ligase (ATP). | 0.728 |
| AKM84739.1 | AKM85000.1 | VE98_C0001G0282 | VE98_C0001G0546 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | formamidopyrimidine-DNA glycosylase, formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.552 |
| AKM84739.1 | AKM85002.1 | VE98_C0001G0282 | VE98_C0001G0548 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | Polymerase I protein. | 0.995 |
| AKM84739.1 | engA | VE98_C0001G0282 | VE98_C0001G0244 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | GTP-binding protein EngA, GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.455 |
| AKM84739.1 | nfo | VE98_C0001G0282 | VE98_C0001G0250 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | Apurinic endonuclease APN1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.683 |
| AKM84739.1 | recA | VE98_C0001G0282 | VE98_C0001G0516 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.957 |
| AKM84739.1 | ruvA | VE98_C0001G0282 | VE98_C0001G0505 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | Holliday junction DNA helicase RuvA, holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.500 |
| AKM84739.1 | topA | VE98_C0001G0282 | VE98_C0001G0214 | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | Topoisomerase I, DNA topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken stran [...] | 0.977 |
| AKM85000.1 | AKM84739.1 | VE98_C0001G0546 | VE98_C0001G0282 | formamidopyrimidine-DNA glycosylase, formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | Polymerase III subunit epsilon, DNA polymerase III subunit epsilon protein. | 0.552 |
| AKM85000.1 | AKM85002.1 | VE98_C0001G0546 | VE98_C0001G0548 | formamidopyrimidine-DNA glycosylase, formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | Polymerase I protein. | 0.993 |
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