STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYL30928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
KYL30929.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.881
KYL30927.1
Septum site-determining protein MinC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.685
A2I98_06990
Peptidase M14; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
KYL30925.1
Cell division topological specificity factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.602
KYL30926.1
Septum site-determining protein MinD; ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
KYL34789.1
50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
KYL30901.1
LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
KYL34448.1
tRNA pseudouridine synthase TruD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
KYL33283.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
A2I98_05430
Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.462
Your Current Organism:
Pseudoalteromonas telluritireducens
NCBI taxonomy Id: 162160
Other names: DSM 16098, P. telluritireducens, Pseudoalteromonas sp. Se-1-2-red, Pseudoalteromonas sp. Te-1-1, VKM B-2382, strain Se-1-2-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.