STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYL30673.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)    
Predicted Functional Partners:
KYL30677.1
Cell division protein ZapC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KYL30674.1
ABC transporter ATP-binding protein; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.876
rlmL
Catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.874
KYL30675.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.868
A2I98_18040
Glycine cleavage system transcriptional repressor; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
KYL32862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
KYL32740.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
KYL32361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
KYL33179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
A2I98_16780
Acetylornithine aminotransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
Your Current Organism:
Pseudoalteromonas telluritireducens
NCBI taxonomy Id: 162160
Other names: DSM 16098, P. telluritireducens, Pseudoalteromonas sp. Se-1-2-red, Pseudoalteromonas sp. Te-1-1, VKM B-2382, strain Se-1-2-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.