STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYL35178.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
A2I98_18260
Diguanylate cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.840
KYL33763.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.833
KYL35179.1
Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.805
KYL34064.1
Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.753
fur
Transcriptional repressor; Negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.753
KYL31396.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.725
KYL33314.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.725
A2I98_09105
Sugar transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.691
KYL35183.1
N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.681
KYL32618.1
Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.656
Your Current Organism:
Pseudoalteromonas telluritireducens
NCBI taxonomy Id: 162160
Other names: DSM 16098, P. telluritireducens, Pseudoalteromonas sp. Se-1-2-red, Pseudoalteromonas sp. Te-1-1, VKM B-2382, strain Se-1-2-red
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.