STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscAIron-sulfur cluster assembly protein IscA; Forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)    
Predicted Functional Partners:
KYL33227.1
Cobalamin 5'-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
KYL33229.1
Scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
KYL33230.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.981
KYL33225.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
hscA
Molecular chaperone HscA; Involved in the maturation of iron-sulfur cluster-containing proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.965
KYL33231.1
Fe-S cluster assembly transcriptional regulator IscR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.920
dnaK
Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.808
A2I98_09375
Cytochrome; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.773
KYL32257.1
Rhodanese domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.724
KYL34574.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.705
Your Current Organism:
Pseudoalteromonas telluritireducens
NCBI taxonomy Id: 162160
Other names: DSM 16098, P. telluritireducens, Pseudoalteromonas sp. Se-1-2-red, Pseudoalteromonas sp. Te-1-1, VKM B-2382, strain Se-1-2-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.