STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsrCSulfur relay protein, TusE/DsrC/DsvC family. (106 aa)    
Predicted Functional Partners:
dsrB
Sulfite reductase, dissimilatory-type beta subunit.
 
 
 
 0.989
dsrA
Sulfite reductase, dissimilatory-type alpha subunit.
 
 
 
 0.989
hmeD
Hdr-like menaquinol oxidoreductase complex, subunit D.
 
 
 0.851
hmeC
Hdr-like menaquinol oxidoreductase complex, subunit C.
 
   
 0.807
aprB
Adenylylsulfate reductase, beta subunit.
  
  
 0.764
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.737
aprA
Adenylylsulfate reductase, alpha subunit.
  
  
 0.721
AMM42081.1
Ferredoxin, putative Hdr-like menaquinol oxidoreductase complex, subunit D.
 
 
 0.700
tmcB
Ferredoxin, putative tetraheme type II cytochrome c3 complex, subunit B.
 
 
 0.699
hmeE
Hdr-like menaquinol oxidoreductase complex, subunit E.
 
     0.677
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.