STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40056.1Metallophosphoesterase. (334 aa)    
Predicted Functional Partners:
AMM40093.1
Ankyrin repeat-containing protein.
    
 0.937
AMM40579.1
Metal-dependent phosphohydrolase, HD region, subdomain protein.
  
 
 0.930
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
  
 
 0.912
AMM40799.1
Multi-sensor hybrid histidine kinase.
  
 
 0.904
AMM41276.1
Stage II sporulation protein E.
    
 0.852
AMM41658.1
PAS domain S-box protein.
    
 0.773
AMM40745.1
Metal-dependent phosphohydrolase, HD region, subdomain protein domain protein.
     
 0.761
AMM40052.1
Hypothetical protein.
       0.678
AMM40053.1
Anion transporter.
       0.678
AMM40054.1
Hypothetical protein.
       0.678
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.