STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40167.1Sugar transferase. (455 aa)    
Predicted Functional Partners:
AMM40173.1
Glycosyl transferase, group 2 family protein.
   
 0.965
AMM41438.1
Glycosyl transferase WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
   
 0.949
AMM41507.1
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.940
AMM40158.1
Polysaccharide export protein.
 
 
 0.910
AMM40511.1
Methyltransferase type 11 domain protein.
  
 
 0.883
AMM41680.1
Polysaccharide export outer membrane protein.
 
 
 0.878
AMM40160.1
Capsular polysaccharide biosynthesis protein.
 
 
 0.858
AMM40159.1
PEP-CTERM locus polysaccharide chain length determinant.
 
 
 0.845
AMM41683.1
Tyrosine-protein kinase.
 
 
 0.832
AMM40165.1
Membrane protein containing PEP-CTERM bacterial domain protein.
      0.812
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.