STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40173.1Glycosyl transferase, group 2 family protein. (377 aa)    
Predicted Functional Partners:
AMM40167.1
Sugar transferase.
   
 0.965
AMM40168.1
Polysaccharide deacetylase.
 
 
 0.942
AMM40511.1
Methyltransferase type 11 domain protein.
  
 0.932
AMM40174.1
Polysaccharide deacetylase.
 
 
 0.917
AMM40172.1
Peptidoglycan bridge formation protein FemAB.
 
     0.901
AMM40171.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
   
 0.800
AMM40170.1
EpsI family protein.
 
    0.792
AMM40169.1
Membrane protein containing Exosortase, EpsH, 8 transmembrane domain protein.
 
    0.791
AMM42257.1
Undecaprenyl-phosphate galactose phosphotransferase.
   
 0.789
AMM40194.1
Polysaccharide deacetylase.
 
 
 0.747
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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