STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40190.11-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase. (247 aa)    
Predicted Functional Partners:
AMM40189.1
Potassium-transporting ATPase subunit A.
 
 0.997
AMM40188.1
Protein containing DUF111.
 
  
 0.975
AMM40202.1
Hypothetical protein.
 
  
 0.934
AMM39962.1
Cobalt transporter CbiM.
  
    0.693
AMM40191.1
Hypothetical protein.
       0.661
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
    
  0.642
AMM40192.1
Hypothetical protein.
       0.639
AMM40194.1
Polysaccharide deacetylase.
       0.637
AMM40193.1
Glycosyl transferase group 1.
  
    0.633
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.