STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40218.1Fibronectin type III. (1169 aa)    
Predicted Functional Partners:
AMM40183.1
Acyl carrier protein.
 
     0.662
AMM40210.1
O-antigen ligase-related protein.
 
     0.632
AMM40217.1
Asparagine synthase.
       0.553
AMM40215.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.542
AMM40216.1
Glycosyl transferase, group 1.
       0.542
AMM40211.1
Radical SAM domain-containing protein.
       0.538
AMM40212.1
Flavin reductase-like, FMN-binding domain protein.
       0.538
AMM40213.1
Group 1 glycosyl transferase.
       0.538
AMM40214.1
Glycosyltransferase.
       0.538
AMM40219.1
Hypothetical protein.
       0.428
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.