STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40383.1Membrane protein containing SNARE associated Golgi protein domain protein. (189 aa)    
Predicted Functional Partners:
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.773
AMM40384.1
Aldehyde ferredoxin oxidoreductase.
       0.757
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.648
rnfB
Electron transport complex, RnfABCDGE type, subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.628
AMM42053.1
(Fe-S)-binding protein.
    
 0.541
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
     
 0.523
aprA
Adenylylsulfate reductase, alpha subunit.
    
  0.502
AMM41083.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (subunit A).
    
  0.502
AMM41528.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit (subunit A); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
  0.502
AMM40529.1
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.473
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.