STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40432.1NUDIX hydrolase; Belongs to the Nudix hydrolase family. (152 aa)    
Predicted Functional Partners:
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.831
AMM40070.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
    
 0.785
AMM41280.1
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.683
AMM40433.1
Hypothetical protein.
       0.664
AMM40579.1
Metal-dependent phosphohydrolase, HD region, subdomain protein.
  
 
  0.639
AMM40799.1
Multi-sensor hybrid histidine kinase.
  
 
  0.594
AMM40745.1
Metal-dependent phosphohydrolase, HD region, subdomain protein domain protein.
  
 
  0.552
AMM41929.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
    
 0.539
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
  
 
  0.537
pyrD
Diguanylate cyclase; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.530
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.