STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40484.1Universal stress protein UspA-like protein. (295 aa)    
Predicted Functional Partners:
AMM40485.1
Haloacid dehalogenase-like hydrolase domain protein.
  
    0.777
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.757
argH
Argininosuccinate lyase.
       0.757
AMM40488.1
Secreted protein.
       0.757
AMM40489.1
Glycosyl transferase family protein.
       0.550
AMM40490.1
ATP-dependent helicase.
       0.550
AMM40491.1
Phosphoesterase PA-phosphatase related protein.
       0.550
qrcB
Molybdopterin oxidoreductase, quinone reductase complex, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.475
qrcA
Cytochrome C, quinone reductase complex, subunit A.
       0.471
qrcC
Quinone reductase complex, subunit C.
       0.452
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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