STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40500.1Thiol:disulfide interchange protein, DsbC. (257 aa)    
Predicted Functional Partners:
AMM40794.1
Lytic transglycosylase.
  
     0.626
pilY-2
Type IV pilus assembly protein.
  
     0.604
AMM40499.1
Conserved hypothetical protein, membrane.
  
    0.588
AMM40498.1
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.581
AMM40497.1
Hypothetical protein.
       0.559
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.538
AMM40070.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
  
 
  0.531
AMM40106.1
Iron-regulated protein.
     
 0.514
AMM40835.1
Pilus assembly protein.
 
 
 0.503
AMM42025.1
Arsenic transporter.
  
     0.502
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.