STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40715.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
AMM40716.1
Transposase.
       0.773
AMM40714.1
Lytic transglycosylase-like, catalytic domain protein.
       0.634
AMM40712.1
Hypothetical protein.
       0.617
AMM40713.1
Hypothetical protein.
       0.617
AMM40710.1
Hypothetical protein.
       0.483
AMM40711.1
Hypothetical protein.
       0.483
AMM40717.1
Phage Gp37Gp68.
       0.453
AMM40708.1
Hypothetical protein.
       0.404
AMM40709.1
DNA helicase, UvrD/REP type.
       0.404
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.