STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM40856.1Radical SAM protein; Overlaps another CDS with the same product name. (385 aa)    
Predicted Functional Partners:
AMM40855.1
Radical SAM protein; Overlaps another CDS with the same product name.
 
     0.948
AMM40852.1
Radical SAM superfamily protein.
 
     0.788
AMM40579.1
Metal-dependent phosphohydrolase, HD region, subdomain protein.
   
 0.653
AMM40998.1
Transcriptional regulator, AsnC family.
 
 
 0.631
moaA
Molybdenum cofactor biosynthesis protein MoeA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
0.617
ribBA
Riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.615
AMM41545.1
AsnC family transcriptional regulator.
 
 
 0.529
AMM40857.1
Secreted protein.
       0.493
AMM40799.1
Multi-sensor hybrid histidine kinase.
   
 
 0.490
AMM40854.1
Transposase for insertion sequence element IS21.
       0.470
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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