STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41041.1Spore coat protein. (345 aa)    
Predicted Functional Partners:
AMM40899.1
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.958
AMM41032.1
Glucose-1-phosphate thymidylyltransferase, short form.
 
 0.958
AMM41033.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.949
AMM41031.1
Spore coat protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
 
 0.932
AMM39919.1
UDP-galactopyranose mutase.
  
 
 0.846
AMM41037.1
Glycosyltransferase.
  
 
  0.828
AMM41039.1
Sugar ABC transporter ATP-binding protein.
     
 0.803
AMM41040.1
O-antigen export system permease protein rfbA.
     
 0.803
AMM39822.1
Pyridoxal phosphate-dependent aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.798
AMM41036.1
1 glycosyl transferase.
  
 
  0.783
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.