STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41088.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
AMM41091.1
Metal dependent phosphohydrolase.
 
     0.912
AMM41087.1
Phosphatidic acid phosphatase type 2/haloperoxidase.
       0.773
AMM41089.1
Protein containing DNA primase, catalytic core.
       0.773
ddl
D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.773
AMM40017.1
Hypothetical protein.
  
     0.766
AMM41389.1
Hypothetical protein.
  
     0.741
AMM42051.1
Class III cytochrome C.
  
     0.735
AMM39817.1
Histidine kinase.
  
     0.709
AMM42085.1
Phosphoesterase RecJ domain-containing protein.
  
     0.702
AMM40027.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.