STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41141.1Peptide ABC transporter substrate-binding protein; Belongs to the ABC transporter superfamily. (319 aa)    
Predicted Functional Partners:
AMM40085.1
Peptide ABC transporter permease.
 
 0.997
AMM40086.1
Peptide ABC transporter permease.
 
 0.990
AMM41140.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.929
AMM40101.1
Peptide ABC transporter substrate-binding protein.
 
 0.927
msbA
Lipid A export ATP-binding/permease protein msbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
   
 
0.829
AMM41138.1
Ferredoxin.
       0.773
AMM41139.1
Protease TldD.
       0.773
AMM39903.1
Multidrug ABC transporter substrate-binding protein.
 
   
  0.770
AMM41795.1
Multidrug ABC transporter ATPase.
  
 
0.727
AMM39902.1
ABC transporter ATP-binding protein/permease.
 
   
  0.687
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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