STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41238.1Protein of unknown function CGGC region. (112 aa)    
Predicted Functional Partners:
AMM41240.1
Hypothetical protein.
 
     0.882
AMM41244.1
Metal-binding protein.
 
     0.821
AMM41239.1
(4Fe-4S)-binding protein.
       0.777
AMM41237.1
(4Fe-4S)-binding protein.
 
     0.771
AMM41241.1
ATPase.
       0.753
AMM41235.1
Nitrogen-fixing protein NifU.
       0.737
AMM41236.1
Molecular chaperone DnaJ.
       0.737
AMM41242.1
ParA/MinD-like ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.732
AMM41234.1
FmdB family transcriptional regulator.
       0.721
AMM41243.1
Uncharacterized conserved protein UCP006593.
 
     0.600
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.