STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41324.1XRE family transcriptional regulator. (214 aa)    
Predicted Functional Partners:
AMM40799.1
Multi-sensor hybrid histidine kinase.
 0.990
AMM41658.1
PAS domain S-box protein.
 
 0.987
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
 
 0.983
AMM41564.1
Sensor histidine kinase PAS domain-containing protein.
 0.973
AMM40439.1
PAS/PAC sensor signal transduction histidine kinase.
  
 0.944
AMM40152.1
Multi-sensor signal transduction histidine kinase.
 0.906
AMM41477.1
Diguanylate cyclase.
 0.884
AMM42238.1
Integral membrane sensor signal transduction histidine kinase.
 0.876
AMM41912.1
Multi-sensor signal transduction histidine kinase.
 
 0.875
AMM40579.1
Metal-dependent phosphohydrolase, HD region, subdomain protein.
  
 0.871
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.