STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porCPyruvate ferredoxin oxidoreductase, gamma subunit. (181 aa)    
Predicted Functional Partners:
porB
Pyruvate ferredoxin oxidoreductase, beta subunit.
 
 0.997
porA
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 
 0.993
porD
Pyruvate ferredoxin oxidoreductase, delta subunit.
 
 0.987
AMM41081.1
2-oxoglutarate ferredoxin oxidoreductase, subunit B.
 
 0.957
AMM42055.1
2-oxoacid:acceptor oxidoreductase, subunit B.
  
 0.951
AMM41070.1
ATP-citrate synthase, alpha subunit.
  
 
 0.922
AMM42054.1
2-oxoacid:acceptor oxidoreductase, subunit A.
 
 0.871
AMM41080.1
2-oxoglutarate ferredoxin oxidoreductase, subunit A.
 
 0.869
rnfB
Electron transport complex, RnfABCDGE type, subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.867
AMM41364.1
(4Fe-4S)-binding protein.
 
 
  0.864
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.