STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41373.1Two-component sensor histidine kinase. (583 aa)    
Predicted Functional Partners:
AMM41217.1
ArsR family transcriptional regulator.
 0.989
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
0.986
AMM40799.1
Multi-sensor hybrid histidine kinase.
 
0.969
AMM41960.1
Chemotaxis protein CheY.
 0.959
AMM40230.1
Response regulator receiver modulated diguanylate cyclase.
 
  
 0.944
AMM40232.1
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
   
  0.929
AMM41276.1
Stage II sporulation protein E.
  
 0.897
AMM40647.1
Phosphodiesterase.
 
 0.872
AMM40646.1
PAS domain S-box protein.
  
 0.835
AMM41002.1
Multi-sensor hybrid histidine kinase.
 
0.834
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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