STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41431.1Glycosyl transferase family 1. (339 aa)    
Predicted Functional Partners:
AMM41432.1
Polymerase.
       0.746
AMM41433.1
Group 1 glycosyl transferase.
       0.746
AMM40511.1
Methyltransferase type 11 domain protein.
 0.729
AMM41438.1
Glycosyl transferase WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
 0.719
AMM40172.1
Peptidoglycan bridge formation protein FemAB.
 
     0.707
AMM40168.1
Polysaccharide deacetylase.
 
    0.701
AMM40210.1
O-antigen ligase-related protein.
  
 
  0.687
AMM41507.1
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.675
AMM41760.1
Trehalose-phosphatase.
  
 0.673
AMM40162.1
Histidine kinase.
  
     0.634
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.