STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41433.1Group 1 glycosyl transferase. (374 aa)    
Predicted Functional Partners:
AMM41432.1
Polymerase.
       0.773
AMM41431.1
Glycosyl transferase family 1.
       0.746
AMM40511.1
Methyltransferase type 11 domain protein.
  
 0.689
AMM41507.1
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.675
AMM41760.1
Trehalose-phosphatase.
  
 0.673
AMM42257.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
 
 0.670
AMM41438.1
Glycosyl transferase WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
 0.617
AMM41797.1
Nucleoside-diphosphate-sugar epimerase.
  
 
  0.587
glgB
Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.585
AMM40899.1
Glucose-1-phosphate thymidylyltransferase.
  
 
  0.561
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.