STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41435.1Coenzyme F390 synthetase. (472 aa)    
Predicted Functional Partners:
AMM40631.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.930
AMM41725.1
Betaine-aldehyde dehydrogenase.
  
 0.930
AMM41436.1
Oxidoreductase.
     
 0.839
AMM41440.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
     0.793
AMM41437.1
Heparinase II/III family protein.
       0.766
AMM41438.1
Glycosyl transferase WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
       0.766
AMM41441.1
Transmembrane protein EpsH.
       0.753
AMM41439.1
Conserved hypothetical protein, secreted.
       0.746
AMM42257.1
Undecaprenyl-phosphate galactose phosphotransferase.
    
  0.700
AMM41434.1
Aminoglycoside 6'-N-acetyltransferase.
       0.689
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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