STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41461.1DNA methylase family protein. (194 aa)    
Predicted Functional Partners:
AMM41462.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
     0.991
AMM41465.1
Type III restriction-modification system DNA endonuclease res.
 
     0.878
AMM41460.1
Toxin Fic.
       0.783
AMM42158.1
Helicase domain-containing protein.
 
     0.731
AMM41463.1
Hypothetical protein.
       0.668
AMM41464.1
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
       0.640
AMM41466.1
Hypothetical protein.
       0.416
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.