STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41485.1Cyclic nucleotide-binding protein. (479 aa)    
Predicted Functional Partners:
AMM41484.1
DNA polymerase III subunit epsilon.
 
 
  0.952
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.860
AMM41483.1
Cyclic nucleotide-binding protein.
 
    
0.814
AMM42058.1
DNA polymerase III alpha subunit.
  
  0.789
AMM41750.1
Protein containing Glutamate synthase, alpha subunit.
  
  
 0.688
AMM41486.1
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.669
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
    
 0.627
AMM40799.1
Multi-sensor hybrid histidine kinase.
    
 0.564
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.546
AMM41002.1
Multi-sensor hybrid histidine kinase.
    
  0.537
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.