STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41602.1Hypothetical protein. (553 aa)    
Predicted Functional Partners:
AMM42257.1
Undecaprenyl-phosphate galactose phosphotransferase.
    
  0.683
AMM41603.1
Hypothetical protein.
       0.655
AMM41604.1
Secreted protein.
       0.599
AMM40430.1
Parallel beta-helix repeat protein.
    
 0.555
AMM41601.1
Secreted protein.
       0.550
AMM41867.1
Conserved hypothetical protein, secreted.
  
 
  0.543
AMM41605.1
Cysteine protease.
       0.502
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
  0.429
AMM41996.1
Flagellar motor protein MotB.
    
  0.429
AMM41606.1
N-acetylmuramoyl-L-alanine amidase.
       0.401
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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