STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41636.1Protein containing ATPase, P-type cation-transporter. (90 aa)    
Predicted Functional Partners:
msbA
Lipid A export ATP-binding/permease protein msbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
   
 0.728
AMM41637.1
Zinc-transporting ATPase.
  
 0.719
AMM40117.1
Inorganic diphosphatase.
    
  0.685
AMM40240.1
Secreted protein containing Peptidase C14, caspase catalytic domain protein.
   
 0.666
AMM41561.1
ATPase.
 
 
 0.663
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
 
 0.651
AMM40645.1
Multidrug ABC transporter ATPase.
   
 0.636
AMM40989.1
Multidrug ABC transporter ATP-binding protein.
   
 0.636
AMM41795.1
Multidrug ABC transporter ATPase.
   
 0.636
AMM41639.1
Copper-translocating P-type ATPase.
  
 0.629
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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