STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41655.1Cytochrome C. (149 aa)    
Predicted Functional Partners:
AMM41654.1
Multi-sensor signal transduction histidine kinase.
 
     0.815
AMM41280.1
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
  0.739
AMM39841.1
tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 
 0.731
AMM41652.1
Fis family transcriptional regulator.
       0.714
AMM41653.1
Response regulator receiver sensor signal transduction histidine kinase.
       0.714
qrcA
Cytochrome C, quinone reductase complex, subunit A.
 
  
 0.694
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
   
  0.660
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.647
qrcB
Molybdopterin oxidoreductase, quinone reductase complex, subunit B; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.635
AMM39999.1
Diguanylate cyclase.
   
 
  0.612
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.