STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41668.1OmpW family protein. (227 aa)    
Predicted Functional Partners:
AMM41940.1
Coproporphyrinogen III oxidase.
  
  
 0.789
AMM41667.1
Conserved hypothetical protein, secreted.
       0.752
AMM41750.1
Protein containing Glutamate synthase, alpha subunit.
    
  0.698
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
     
 0.684
AMM41996.1
Flagellar motor protein MotB.
     
 0.684
AMM41539.1
Conserved hypothetical protein, secreted.
   
 
 0.660
AMM41933.1
Hypothetical protein.
   
 
 0.660
AMM41066.1
TonB-dependent receptor.
     
 0.657
AMM41130.1
TonB-denpendent receptor.
     
 0.657
AMM40436.1
Conserved hypothetical protein, secreted.
     
 0.602
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.