STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41732.1Transposase IS4 family protein. (98 aa)    
Predicted Functional Partners:
AMM41733.1
Initiation factor 2B related protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.444
AMM41731.1
Polyketide cyclase / dehydrase and lipid transport family protein.
       0.429
AMM41730.1
Fe-S oxidoreductase.
       0.414
AMM41725.1
Betaine-aldehyde dehydrogenase.
       0.411
AMM41726.1
Class II aldolase/adducin-like protein.
       0.411
AMM41727.1
Methylthioribose-1-phosphate isomerase; Overlaps another CDS with the same product name; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.411
AMM41728.1
Methylthioribose-1-phosphate isomerase; Overlaps another CDS with the same product name; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.411
AMM41729.1
Purine nucleoside phosphorylase.
       0.411
AMM41724.1
Secreted protein containing DUF1329.
       0.400
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
Server load: low (28%) [HD]