STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41742.1Hypothetical protein. (338 aa)    
Predicted Functional Partners:
hdrC-4
Heterodisulfide reductase, subunit C.
       0.664
AMM41744.1
Methyl-viologen-reducing hydrogenase, delta subunit.
       0.664
AMM41745.1
Zinc-finger protein.
       0.664
AMM41746.1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.664
AMM41747.1
Methyl-viologen-reducing hydrogenase, delta subunit.
       0.664
AMM41748.1
Glutamate synthase.
       0.664
AMM41749.1
Glutamate synthase; Belongs to the glutamate synthase family.
       0.664
AMM41750.1
Protein containing Glutamate synthase, alpha subunit.
       0.664
AMM41740.1
Protein belonging to Uncharacterized protein family UPF0153.
       0.478
AMM41741.1
Hypothetical protein.
       0.478
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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