STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41802.1Nucleoside triphosphate pyrophosphohydrolase. (258 aa)    
Predicted Functional Partners:
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
  
 
 0.884
AMM40799.1
Multi-sensor hybrid histidine kinase.
  
 
  0.880
AMM41276.1
Stage II sporulation protein E.
   
 
  0.840
ribBA
Riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.794
AMM41803.1
Colicin V production protein.
       0.791
AMM40579.1
Metal-dependent phosphohydrolase, HD region, subdomain protein.
  
 
  0.790
AMM41801.1
FxsA cytoplasmic membrane protein.
       0.775
AMM41759.1
uroporphyrinogen-III C-methyltransferase.
    
  0.765
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.758
AMM41277.1
Multi-sensor hybrid histidine kinase.
    
  0.687
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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