Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM40682.1 | AMM41815.1 | HS1_000878 | HS1_002023 | Leucine rich repeat protein. | NAD-dependent epimerase/dehydratase. | 0.458 |
AMM40682.1 | AMM41816.1 | HS1_000878 | HS1_002024 | Leucine rich repeat protein. | Isoprenylcysteine carboxyl methyltransferase. | 0.804 |
AMM40928.1 | AMM41816.1 | HS1_001124 | HS1_002024 | Nitroreductase. | Isoprenylcysteine carboxyl methyltransferase. | 0.590 |
AMM41812.1 | AMM41813.1 | HS1_002020 | HS1_002021 | Hypothetical protein. | Membrane protein involved in aromatic hydrocarbon degradation. | 0.773 |
AMM41812.1 | AMM41814.1 | HS1_002020 | HS1_002022 | Hypothetical protein. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.668 |
AMM41812.1 | AMM41815.1 | HS1_002020 | HS1_002023 | Hypothetical protein. | NAD-dependent epimerase/dehydratase. | 0.668 |
AMM41812.1 | AMM41816.1 | HS1_002020 | HS1_002024 | Hypothetical protein. | Isoprenylcysteine carboxyl methyltransferase. | 0.668 |
AMM41812.1 | AMM41817.1 | HS1_002020 | HS1_002025 | Hypothetical protein. | Histidine kinase. | 0.668 |
AMM41812.1 | AMM41818.1 | HS1_002020 | HS1_002026 | Hypothetical protein. | Fis family transcriptional regulator. | 0.571 |
AMM41812.1 | AMM41819.1 | HS1_002020 | HS1_002027 | Hypothetical protein. | Acetoacetate metabolism regulatory protein AtoC. | 0.571 |
AMM41813.1 | AMM41812.1 | HS1_002021 | HS1_002020 | Membrane protein involved in aromatic hydrocarbon degradation. | Hypothetical protein. | 0.773 |
AMM41813.1 | AMM41814.1 | HS1_002021 | HS1_002022 | Membrane protein involved in aromatic hydrocarbon degradation. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.678 |
AMM41813.1 | AMM41815.1 | HS1_002021 | HS1_002023 | Membrane protein involved in aromatic hydrocarbon degradation. | NAD-dependent epimerase/dehydratase. | 0.668 |
AMM41813.1 | AMM41816.1 | HS1_002021 | HS1_002024 | Membrane protein involved in aromatic hydrocarbon degradation. | Isoprenylcysteine carboxyl methyltransferase. | 0.668 |
AMM41813.1 | AMM41817.1 | HS1_002021 | HS1_002025 | Membrane protein involved in aromatic hydrocarbon degradation. | Histidine kinase. | 0.668 |
AMM41813.1 | AMM41818.1 | HS1_002021 | HS1_002026 | Membrane protein involved in aromatic hydrocarbon degradation. | Fis family transcriptional regulator. | 0.571 |
AMM41813.1 | AMM41819.1 | HS1_002021 | HS1_002027 | Membrane protein involved in aromatic hydrocarbon degradation. | Acetoacetate metabolism regulatory protein AtoC. | 0.571 |
AMM41814.1 | AMM41812.1 | HS1_002022 | HS1_002020 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Hypothetical protein. | 0.668 |
AMM41814.1 | AMM41813.1 | HS1_002022 | HS1_002021 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Membrane protein involved in aromatic hydrocarbon degradation. | 0.678 |
AMM41814.1 | AMM41815.1 | HS1_002022 | HS1_002023 | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | NAD-dependent epimerase/dehydratase. | 0.800 |
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