STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM41850.15-oxoprolinase. (691 aa)    
Predicted Functional Partners:
AMM41851.1
N-methylhydantoinase B/acetone carboxylase, alpha subunit.
 0.999
AMM41750.1
Protein containing Glutamate synthase, alpha subunit.
    
 0.780
rnfB
Electron transport complex, RnfABCDGE type, subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 
  0.723
AMM42129.1
Peptidase M20.
  
 
 0.575
AMM40673.1
AIG2-like domain protein.
     
 0.567
AMM41586.1
Phosphoribosylformylglycinamidine synthase subunit I.
    
  0.547
AMM40335.1
Isochorismatase-like domain protein.
    
  0.528
AMM40459.1
Nicotinamidase.
    
  0.528
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.523
AMM41849.1
Hypothetical protein.
       0.520
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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