STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM42022.1Nucleotidyltransferase domain protein. (100 aa)    
Predicted Functional Partners:
AMM42021.1
Protein containing DUF86.
 
 
  0.945
AMM42157.1
Hypothetical protein.
 
 
  0.817
AMM40678.1
Protein containing DUF86.
 
 
  0.800
AMM40373.1
Hypothetical protein.
 
 
  0.789
AMM40372.1
Nucleotidyltransferase.
  
     0.775
AMM40353.1
Protein containing DUF86.
  
  
  0.619
AMM42023.1
Hypothetical protein.
 
     0.614
AMM42020.1
Hypothetical protein.
       0.592
AMM42024.1
Hypothetical protein.
       0.551
AMM42019.1
Hypothetical protein.
       0.440
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.