STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM42052.1Transcriptional regulator, histidine kinase sensor. (167 aa)    
Predicted Functional Partners:
AMM40799.1
Multi-sensor hybrid histidine kinase.
  
 
 0.791
AMM41583.1
Membrane protein containing ATP-binding region, ATPase-like protein.
  
 
 0.699
AMM41002.1
Multi-sensor hybrid histidine kinase.
  
 
  0.661
AMM41654.1
Multi-sensor signal transduction histidine kinase.
   
 
  0.658
AMM40647.1
Phosphodiesterase.
    
  0.630
AMM40981.1
Multi-sensor hybrid histidine kinase.
   
 
  0.614
AMM42051.1
Class III cytochrome C.
       0.566
AMM42053.1
(Fe-S)-binding protein.
       0.542
AMM42054.1
2-oxoacid:acceptor oxidoreductase, subunit A.
       0.528
AMM42055.1
2-oxoacid:acceptor oxidoreductase, subunit B.
       0.528
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.