STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM42284.1Glutamate-pyruvate aminotransferase. (392 aa)    
Predicted Functional Partners:
AMM42285.1
Homoserine dehydrogenase.
  
 0.895
AMM41070.1
ATP-citrate synthase, alpha subunit.
  
 
 0.856
AMM40477.1
Chorismate mutase.
 
 
 0.825
AMM42286.1
Putative homoserine kinase.
     
 0.768
AMM41750.1
Protein containing Glutamate synthase, alpha subunit.
    
 0.743
AMM40106.1
Iron-regulated protein.
  
 
 0.675
AMM41749.1
Glutamate synthase; Belongs to the glutamate synthase family.
  
 
 0.630
AMM42290.1
Protein containing DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.614
AMM42287.1
Hypothetical protein.
       0.611
rpmH
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
       0.611
Your Current Organism:
Desulfofervidus auxilii
NCBI taxonomy Id: 1621989
Other names: C. Desulfofervidus auxilii, Candidatus Desulfofervidus auxilii, delta proteobacterium HotSeep1
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