Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPQ89_04810 | pstS | GCA_001953785_00151 | GCA_001953785_00068 | Unannotated protein; Belongs to the nlpA lipoprotein family. | Unannotated protein. | 0.575 |
CPQ89_08755 | guaA | GCA_001953785_00656 | GCA_001953785_00633 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.922 |
CPQ89_08755 | pstA | GCA_001953785_00656 | GCA_001953785_00066 | Unannotated protein. | Unannotated protein. | 0.740 |
CPQ89_08755 | pstB | GCA_001953785_00656 | GCA_001953785_00064 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.418 |
CPQ89_08755 | pstB-2 | GCA_001953785_00656 | GCA_001953785_00065 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.418 |
CPQ89_08755 | pstC | GCA_001953785_00656 | GCA_001953785_00067 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.743 |
CPQ89_08755 | pstS | GCA_001953785_00656 | GCA_001953785_00068 | Unannotated protein. | Unannotated protein. | 0.818 |
CPQ89_09980 | prfB | GCA_001953785_02157 | GCA_001953785_02155 | Unannotated protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.862 |
CPQ89_09980 | pstC | GCA_001953785_02157 | GCA_001953785_00067 | Unannotated protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.524 |
CPQ89_09980 | pstS | GCA_001953785_02157 | GCA_001953785_00068 | Unannotated protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Unannotated protein. | 0.592 |
guaA | CPQ89_08755 | GCA_001953785_00633 | GCA_001953785_00656 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.922 |
guaA | prfB | GCA_001953785_00633 | GCA_001953785_02155 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.516 |
guaA | pstA | GCA_001953785_00633 | GCA_001953785_00066 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.600 |
guaA | pstB | GCA_001953785_00633 | GCA_001953785_00064 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.507 |
guaA | pstB-2 | GCA_001953785_00633 | GCA_001953785_00065 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.507 |
guaA | pstS | GCA_001953785_00633 | GCA_001953785_00068 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.687 |
phoU | pstA | GCA_001953785_00063 | GCA_001953785_00066 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.993 |
phoU | pstB | GCA_001953785_00063 | GCA_001953785_00064 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.987 |
phoU | pstB-2 | GCA_001953785_00063 | GCA_001953785_00065 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.985 |
phoU | pstC | GCA_001953785_00063 | GCA_001953785_00067 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.966 |
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