Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPQ89_03355 | CPQ89_04900 | GCA_001953785_01564 | GCA_001953785_00133 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.724 |
CPQ89_03355 | rfbB | GCA_001953785_01564 | GCA_001953785_01574 | Unannotated protein. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.435 |
CPQ89_03355 | rfbC | GCA_001953785_01564 | GCA_001953785_01575 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.449 |
CPQ89_04900 | CPQ89_03355 | GCA_001953785_00133 | GCA_001953785_01564 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein. | 0.724 |
CPQ89_04900 | CPQ89_10020 | GCA_001953785_00133 | GCA_001953785_02149 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein. | 0.964 |
CPQ89_04900 | CPQ89_10190 | GCA_001953785_00133 | GCA_001953785_02061 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein. | 0.898 |
CPQ89_04900 | GCA_001953785_01669 | GCA_001953785_00133 | GCA_001953785_01669 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein. | 0.829 |
CPQ89_04900 | glmU | GCA_001953785_00133 | GCA_001953785_00512 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.938 |
CPQ89_04900 | murA | GCA_001953785_00133 | GCA_001953785_00531 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.919 |
CPQ89_04900 | murA-2 | GCA_001953785_00133 | GCA_001953785_01126 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.919 |
CPQ89_04900 | rfbB | GCA_001953785_00133 | GCA_001953785_01574 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.927 |
CPQ89_04900 | rfbC | GCA_001953785_00133 | GCA_001953785_01575 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.851 |
CPQ89_04900 | tilS | GCA_001953785_00133 | GCA_001953785_00227 | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Unannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. | 0.745 |
CPQ89_10020 | CPQ89_04900 | GCA_001953785_02149 | GCA_001953785_00133 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.964 |
CPQ89_10020 | glmU | GCA_001953785_02149 | GCA_001953785_00512 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.480 |
CPQ89_10020 | murA | GCA_001953785_02149 | GCA_001953785_00531 | Unannotated protein. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.530 |
CPQ89_10020 | murA-2 | GCA_001953785_02149 | GCA_001953785_01126 | Unannotated protein. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.556 |
CPQ89_10190 | CPQ89_04900 | GCA_001953785_02061 | GCA_001953785_00133 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.898 |
CPQ89_10190 | rfbB | GCA_001953785_02061 | GCA_001953785_01574 | Unannotated protein. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.661 |
GCA_001953785_01669 | CPQ89_04900 | GCA_001953785_01669 | GCA_001953785_00133 | Unannotated protein. | Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.829 |
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