STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQ89_01545Unannotated protein; Belongs to the bacterial solute-binding protein 9 family. (288 aa)    
Predicted Functional Partners:
CPQ89_01555
Unannotated protein.
 
 
 0.997
CPQ89_01550
Unannotated protein.
 
 
 0.990
CPQ89_03915
Unannotated protein.
  
 
 0.850
GCA_001953785_01441
Unannotated protein.
 
 
 0.849
CPQ89_10815
Unannotated protein; Belongs to the ABC transporter superfamily.
    
 0.748
rpmB
Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.594
birA
Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
       0.502
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.471
CPQ89_04775
Unannotated protein.
 
  
 0.426
pepX
Unannotated protein; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
  
     0.425
Your Current Organism:
Lactobacillus murinus
NCBI taxonomy Id: 1622
Other names: ATCC 35020, CCUG 33904, CIP 104818, CNRZ 220, DSM 20452, IFO 14221, L. murinus, LMG 14189, LMG:14189, NBRC 14221, strain 313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.